Analysis of DNA sequences similarity based on a new 3-D graphical representation method

Kshatrapal SINGH1, Ashish KUMAR1, Manoj Kumar GUPTA2
1 Department of CSE, ITS Engineering College, Greater Noida, India
mekpsingh1@gmail.com, ashishcse29@gmail.com
2 School of CSE, SMVD University, Katra (J&K), India
manoj.cst@gmail.com

Abstract: Finding the density of specific nucleotides is an important task in DNA sequence analysis. The technique, which is based on graphical representations of DNA sequences, allows for comparison, testing, and storage of different sequences. We create three typical curves in this research based on the categorization of four base DNA sequences. The DNA sequence fluctuation and geometrical centers of three curves organized into 12 component vectors were represented. The Euclidean distance between generated vectors is used to study and compare coding sequences for ten different species.

Keywords: Similarity analysis, graphical representation, geometrical centers, numerical characterization.

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CITE THIS PAPER AS:
Kshatrapal SINGH, Ashish KUMAR, Manoj Kumar GUPTA, Analysis of DNA sequences similarity based on a new 3-D graphical representation method, Romanian Journal of Information Technology and Automatic Control, ISSN 1220-1758, vol. 31(3), pp. 7-14, 2021. https://doi.org/10.33436/v31i3y202101